Remove embedded nibabel and depend on it instead.

debian/changelog

+afni-20190220 (20190829-2) buster-devel; urgency=medium
+
+  * Remove embedded nibabel and depend on it instead.
+
+ -- Mark Hymers <mark.hymers@ynic.york.ac.uk>  Fri, 13 Sep 2019 10:37:51 +0100
+
 afni-20190220 (20190829-1) buster-devel; urgency=medium
 
   * Initial release.

debian/control

@@ -8,7 +8,11 @@ Homepage: https://afni.nimh.nih.gov
 
 Package: afni-20190220
 Architecture: any
-Depends: ${shlibs:Depends}, ${misc:Depends}
+Depends: ${shlibs:Depends}, ${misc:Depends},
+ python-numpy, python3-numpy,
+ python-scipy, python3-scipy,
+ python-matplotlib, python3-matplotlib,
+ python-nibabel, python3-nibabel
 Description: AFNI brain imaging software: 20190220 release
  AFNI (Analysis of Functional NeuroImages) is a leading software suite of C,
  Python, R programs and shell scripts primarily developed for the analysis and

debian/rules

@@ -28,6 +28,10 @@ override_dh_auto_install:
 	make install_plugins
 	make install_lib
 	cp html/afnigui_logo.jpg afni-20190220.jpg
+	# Don't ship nibabel, it's horrendously out of date
+	# Depend on it instead (this is only used in tedana.py
+	# and is tested in there)
+	rm -fr linux_ubuntu_16_64/meica.libs/nibabel
 
 override_dh_clean:
 	dh_clean