Commits · master · naf / naf · GitLab

13 Feb, 2020 7 commits
- Make confidence intervals more visible · f2191eab
  Mark Hymers authored Feb 13, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  f2191eab
- Fix running tests · 5701e976
  Mark Hymers authored Feb 13, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  5701e976
- Fix install point · 8354d8c7
  Mark Hymers authored Feb 13, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  8354d8c7
- Install sudo/fsl templates in before_script · 86477512
  Mark Hymers authored Feb 13, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  86477512
- Merge branch 'buster_fixes' into 'master' · e974c23a
  Mark Hymers authored Feb 13, 2020
```
Buster fixes

Closes #12

See merge request naf/naf!10
```
  e974c23a
- Remove buster_fixes from CI in preparation for merge · 14ef505f
  Mark Hymers authored Feb 13, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  14ef505f
- Use RTD theme for reports · f4eface8
  Mark Hymers authored Feb 13, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  f4eface8
12 Feb, 2020 7 commits
- Remove unused import · 2e84b413
  Mark Hymers authored Feb 12, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  2e84b413
- Add nibabel as a dep · 4ef84cc8
  Mark Hymers authored Feb 12, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  4ef84cc8
- Be defensive in draw_cursors · 983ae378
  Mark Hymers authored Feb 12, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  983ae378
- Fix syntax · e32f7251
  Mark Hymers authored Feb 12, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  e32f7251
- Convert vtkutils to use nibabel · 16fd7f2d
  Mark Hymers authored Feb 12, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  16fd7f2d
- Fix dereferencing of strings in Study Definer · 227edf96
  Mark Hymers authored Feb 12, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  227edf96
- Add deployment step · d2153543
  Mark Hymers authored Feb 12, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  d2153543
11 Feb, 2020 6 commits
- Ignore Deprecation warning in our own code - it's a deliberate test · 6d09ac78
  Mark Hymers authored Feb 11, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  6d09ac78
- Use newer numpy API in support · afd90b0a
  Mark Hymers authored Feb 11, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  afd90b0a
- Use newer numpy API in stockwell · dc560da6
  Mark Hymers authored Feb 11, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  dc560da6
- Use newer numpy API in leadfield · 237a660c
  Mark Hymers authored Feb 11, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  237a660c
- python-imaging -> python-pil · 30465bc7
  Mark Hymers authored Feb 11, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  30465bc7
- Fix up running MPI tests · 6ae2a54c
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  6ae2a54c
10 Feb, 2020 20 commits
- More test fixes · 7d5ce4a8
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  7d5ce4a8
- Epoch Rejection fixes · 3f71b87a
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  3f71b87a
- Allow specifying NAFTEST to Makefile · 20b4ff08
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  20b4ff08
- Restore NAFTEST variable · 783b44d6
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  783b44d6
- Convert generator syntax · 39992490
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  39992490
- Import reduce · c2caeb40
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  c2caeb40
- Stop using long · 48c273a5
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  48c273a5
- Convert xrange usage · 1125f3b6
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  1125f3b6
- Use relative imports · a3b30df0
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  a3b30df0
- Remove use of StandardError · 7ca9cb12
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  7ca9cb12
- Remove has_key usage · 30c54ecd
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  30c54ecd
- Fix indexing error · 99c093b8
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  99c093b8
- Use Makefile to run tests · 7abdcfa4
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  7abdcfa4
- Move tutorial to use nibabel · 28736c9e
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  28736c9e
- Dump stderr on failure · 72c62482
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  72c62482
- Add back missing code and add test · 834d3a24
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  834d3a24
- Remove useless imports and code · f93befa9
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  f93befa9
- Fix package name · f9cd5d5d
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  f9cd5d5d
- Only look for classes named *Test · 9976cdcb
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  9976cdcb
- Move from nosetests to py.test · 2344b695
  Mark Hymers authored Feb 10, 2020
```
Signed-off-by: Mark Hymers <mark.hymers@ynic.york.ac.uk>
```
  2344b695